Valuable Morphological Traits and Genetic Resources of Wild Almond Relatives in Kazakhstan


Orazov A. Myrzagaliyeva A. Tustubayeva S. Irsaliyev S. Sailaubekova A. Turalin B.
June 2025Engineered Science Publisher

ES Food and Agroforestry
2025#20Issue 2025

Wild almond species represent a critical component of Kazakhstan’s endemic flora, yet their genetic structure and taxonomic relationships remain largely unresolved. This study provides an integrative assessment of four wild almond species (Prunus ledebouriana, P. tenella, P. petunnikowii, and P. spinosissima) in comparison with the cultivated P. dulcis, combining morphological evaluation and multilocus molecular analysis. Morphological traits, including shrub height, leaf shape, and fruit dimensions, were measured across geographically distinct populations. Molecular analyses employed three nuclear markers (ITS (internal transcribed spacer), s6pdh and KIM (maturase K) and six chloroplast markers (rbcL, atpF–atpH, trnL– trnF, trnS–trnG, psbA–trnH, and psbK–psbI), selected for their proven utility in recent almond studies. The ITS region showed the highest level of polymorphism, with 142 variable sites, followed by cpDNA markers atpF–atpH and psbA–trnH. Phylogenetic trees based on individual and combined datasets revealed consistent clustering of P. ledebouriana and P. tenella as sister taxa, while P. petunnikowii and P. spinosissima formed more distantly related branches. Nucleotide composition and species-specific substitution patterns further confirmed their divergence. In comparison to recent research that has focused primarily on cultivated almond varieties, this study provides novel insights into the evolutionary dynamics and genetic distinctiveness of wild almond populations in Central Asia. These findings highlight the value of an integrative approach to resolving phylogenetic structure and support future conservation and utilisation efforts for Amygdalus genetic resources.

Amygdalus subgenus , Conservation genetics , Genetic diversity , Internal transcribed spacer markers , Morphological traits , Phylogenetic analysis , Prunus ledebouriana , Wild almond species

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Laboratory “NatureLab”, Astana International University, 8 Kabanbay Batyra ave, Astana, 010000, Kazakhstan
Faculty of Biology, University of Warsaw, 1 Ilji Miecznikowa str, Warsaw, 02096, Poland
Department of Biology, K. Zhubanov Aktobe Regional University, 34 Alia Moldagulova Ave, Aktobe, 030000, Kazakhstan

Laboratory “NatureLab”
Faculty of Biology
Department of Biology

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